B lymphocytes are a population of white blood cells that express clonally diverse cell surface Ig (immunoglobulin) receptors, recognizing specific antigenic epitopes. The development of B-cells encompasses a continuum of stages that begin in primary lymphoid tissue (eg., human fetal liver and fetal/adult marrow), with subsequent functional maturation in secondary lymphoid tissue (eg., human lymph nodes and spleen). The functional/protective end point is antibody production by terminally differentiated plasma cells (Ref.1 ). B cells express immunoglobulin (Ig) molecules on their outer surface and secrete them into the extracellular space. Secreted Ig is known as antibody. Antibodies serve as effector molecules that neutralize microbes by binding to exposed antigens and targeting them to other components of the immune system, such as phagocytic cells and complement, that effect clearance. The genes that encode for antibodies are generated by many diversifying mechanisms including combinatorial rearrangement of gene segments, addition of non-templated (n) nucleotides at the junctions, and somatic hyper-mutation. Ig genes generate diversity in two stages: an antigen-independent and an antigen-dependent stage. Antigen independent diversity is generated in the bone marrow, where B cells originate, by combinatorial rearrangement of gene segments and junctional diversity. Combinatorial diversity is created in a number of ways. First, each antibody molecule comprises one heavy- and one light-chain protein. Both the light- and heavy-chain genes are encoded by gene segments that are genetically rearranged during a process known as V(D)J recombination. Heavy chains are made up of three gene segments—variable (VH), diversity (DH) and joining (JH) where as light chains only have a V and J segment. In humans, there are ~50 known functional VH segments, 27 known functional DH segments, and six known functional JH segments. This arrangement allows for~8100 combinations in the heavy chain alone. Humans also have two light-chain loci, κ and λ. Only one of these loci is expressed per cell so that each antibody either has a κ light chain or a λ light chain. Humans have 44 functional V κ, 5 Jκ, 33Vλ genes and 5 Jλ resulting in 220 possible κ chains and 165 possible λ chains. Thus this combinatorial rearrangement alone allows for greater than 3 million antibodies. Junctional diversity is the result of multiple recombination site choices for each recombination event and the addition of n nucleotides. n nucleotides are sometimes added at the junction by terminal deoxynucleotidyl transferase (TdT) between adjoining gene segments. Antigen-dependent diversity is generated by somatic hyper mutation in the periphery in a manner dependent on activation-induced cytidine deaminase (AID); during this process, mutations in the Ig genes are accumulated at rate of up to 106 times the normal background rate B cells are subsequently selected for enhanced affinity for the eliciting antigen. It is estimated that these processes of diversification can generate ~1012 different antibodies making it challenging to correctly identify the underlying germline gene segments and subsequently the sequences of the complementarity determining regions (CDRs).(Ref. 2 ).
References:
LeBien TW, Tedder TF.
Blood. 2008 Sep 1;112(5):1570-80. 2.SoDA2: a Hidden Markov Model approach for identification of immunoglobulin rearrangements. Munshaw S, Kepler TB. Bioinformatics. 2010 Apr 1;26(7):867-72. 3.Signaling proteins and transcription factors in normal and malignant early B cell development. Pérez-Vera P, Reyes-León A, Fuentes-Pananá EM. Bone Marrow Res. 2011;2011:502751. 4.Repertoire selection by pre-B-cell receptors and B-cell receptors, and genetic control of B-cell development from immature to mature B cells. Melchers F, ten Boekel E, Seidl T, Kong XC, Yamagami T, Onishi K, Shimizu T, Rolink AG, Andersson J. Immunol Rev. 2000 Jun;175:33-46. 5.A B-cell receptor-specific selection step governs immature to mature B cell differentiation. Levine MH, Haberman AM, Sant'Angelo DB, Hannum LG, Cancro MP, Janeway CA Jr, Shlomchik MJ. Proc Natl Acad Sci U S A. 2000 Mar 14;97(6):2743-8. 6.B-lymphocyte biology.
Kurosaki T.
|